To realize the relative distribution measurement of neutron flux in reactor core, the measurement device for multi-channel neutron flux relative distribution has been developed, based on the radioactive counting of activated detection slice measured by NaI detector. The measurement device is made up of PTMC12 data-acquisition board, industrial PC and MNFDAS software, which can automatically achieve the timing and counting function in both cyclical and non-cyclical models, meanwhile the measuring results can be saved as both graphic and data files. The test shows that the stability of the measurement device is excellent with relative deviation within 1%, which can guarantee the requirement of real-time and long-term stable measurement of relative distribution measurement of neutron flux in reactor.